Read through all the posts and checked everything but can't get multiple sites

[AskJohn]

I checked all the posts and everything is fine, rebooted the server / restarted services check the vhosts, looked at the log files but I still can't get domains to point to the directories that have all the files, checked and renamed the index.html so index.php is read.

Could this be an .htaccess issue somewhere?

[AskJohn]

Also tried the cpanel import all I got was the structure and html data no mysql or emails. 

Also when I boot now I need to have my usb installed and boot from there.  How can I force a boot from the boot partition on the local drive?